Researcher Database

KUBOTA YUKIHIKO

Department / Course College of Life Sciences Department of Bioinformatics

Title / Position Assistant Professor

Papers
1.	2022/04	The PAF1 complex cell autonomously promotes oogenesis in Caenorhabditis elegans. │ Genes to cells : devoted to molecular & cellular mechanisms │ (Co-authored)
2.	2022/04/01	Evolutionary analysis of the causative genes of the extracellular matrix-related diseases │ ,pp.43-56 (Co-authored)
3.	2022/02	In silico Analysis of SARS-CoV-2 ORF8-Binding Proteins Reveals the Involvement of ORF8 in Acquired-Immune and Innate-Immune Systems. │ Frontiers in medicine │ 9,pp.824622 (Co-authored)
4.	2021/11	A class I histone deacetylase HDA-2 is essential for embryonic development and size regulation of fertilized eggs in Caenorhabditis elegans. │ Genes & genomics │ (Co-authored)
5.	2021/11	Repulsive guidance molecule acts in axon branching in Caenorhabditis elegans. │ Scientific reports │ 11 (1),pp.22370 (Co-authored)
6.	2021/06	Zinc finger protein 483 (ZNF483) regulates neuronal differentiation and methyl-CpG-binding protein 2 (MeCP2) intracellular localization. │ Biochemical and biophysical research communications │ 568,pp.68-75 (Co-authored)
7.	2021/03	Overlapping and non-overlapping roles of the class-I histone deacetylase-1 corepressors LET-418, SIN-3, and SPR-1 in Caenorhabditis elegans embryonic development. │ Genes & genomics │ (Co-authored)
8.	2021/03/15	The functional classification of ORF8 in SARS-CoV-2 replication, immune evasion, and viral pathogenesis inferred through phylogenetic profiling │ Evolutionary Bioinformatics │ 17,pp.1-7 (Co-authored)
9.	2021/03	Thyroid hormones regulate goblet cell differentiation and Fgf19-Fgfr4 signaling. │ Endocrinology │ (Co-authored)
10.	2020/12/02	Genetic interactions among ADAMTS metalloproteases and basement membrane molecules in cell migration in Caenorhabditis elegans. │ PloS one │ 15 (12),pp.e0240571 (Co-authored)
11.	2020/07	The nonstructural proteins NS7b and NS8 were likely to be phylogenetically associated with the 2019-nCoV evolution. │ Infections Genetics and Evolution │ 81,pp.104272 (Co-authored)
12.	2019/12	Genome-Wide Analysis of Whole Human Glycoside Hydrolases by Data-Driven Analysis in Silico │ Int J Mol Sci │ 20 (24),pp.6290 (Co-authored)
13.	2019/10	In Silico Study of Rett Syndrome Treatment-Related Genes, MECP2, CDKL5, and FOXG1, by Evolutionary Classification and Disordered Region Assessment │ Int J Mol Sci │ 20 (22),pp.5593 (Co-authored)
14.	2019/09	Gene Cascade Finder: A tool for identification of gene cascades and its application in Caenorhabditis elegans. │ PLoS One │ 14 (9),pp.e0215197 (Co-authored)
15.	2019/08	Mitochondrial dysfunction causes Ca2+ overload and ECM degradation-mediated muscle damage in C. elegans │ The FASEB Journal │ 33 (8),pp.9540-9550 (Co-authored)
16.	2019/06	The role of Tissue Inhibitors of Metalloproteinases in organ development and regulation of ADAMTS family metalloproteinases in Caenorhabditis elegans │ Genetics │ 212 (2),pp.523-535 (Co-authored)
17.	2016/03	Organ Length Control by an ADAMTS Extracellular Protease in Caenorhabditis elegans. │ G3 (Bethesda) │ 6 (5),pp.1449-1457 (Co-authored)
18.	2015/01	The BED finger domain protein MIG-39 halts migration of distal tip cells in Caenorhabditis elegans. │ Dev Biol │ 397 (2),pp.151-161 (Co-authored)
19.	2014/04	The PAF1 complex is involved in embryonic epidermal morphogenesis in Caenorhabditis elegans. │ Dev Biol │ 391 (1),pp.43-53 (Co-authored)
20.	2014/02	The novel secreted factor MIG-18 acts with MIG-17/ADAMTS to control cell migration in Caenorhabditis elegans. │ Genetics │ 196 (2),pp.471-479 (Co-authored)
21.	2013/08	The novel Rac effector RIN-1 regulates neuronal cell migration and axon pathfinding in C. elegans. │ Development │ 140 (16),pp.3435-3444 (Co-authored)
22.	2012/04	Tissue Architecture in the Caenorhabditis elegans Gonad Depends on Interactions Among Fibulin-1, Type IV Collagen and the ADAMTS Extracellular Protease │ Genetics │ 190 (4),pp.1379-1388 (Co-authored)
23.	2010/10	Chondroitin Sulfate Synthase-2/Chondroitin Polymerizing Factor Has Two Variants with Distinct Function │ J Biol. Chem. │ 285 (44),pp.34155-34167 (Co-authored)
24.	2010/10	Role of ADAMTSs in cell migration in the nematode C. elegans │ Seikagakau │ 82 (10),pp.957-962 (Co-authored)
25.	2008/12	MIG-17/ADAMTS controls cell migration by recruiting nidogen to the basement membrane in C. elegans │ Proc. Natl. Acad. Sci. U. S. A. │ 105 (52),pp.20804-20809 (Co-authored)
26.	2008/01	転写制御因子Pax6によるインテグリン発現モードの転換―線虫のインテグリン研究からわかること │ 蛋白質核酸酵素 │ 53,pp.74-75 (Sole-authored)
27.	2007/10	基底膜ADAMTSによる器官形成の制御 │ 細胞工学 │ 26,pp.1136-1141 (Co-authored)
28.	2006/08	C-elegans as a model system to study the function of the COG complex in animal development │ Biol. Chem. │ 387 (8),pp.1031-1035 (Co-authored)
29.	2006/01	The conserved oligomeric Golgi complex acts in organ morphogenesis via glycosylation of an ADAM protease in C-elegans │ Development │ 133 (2),pp.263-273 (Co-authored)
30.	2004/11	A fibulin-1 homolog interacts with an ADAM protease that controls cell migration in C-elegans │ Curr. Biol. │ 14 (22),pp.2011-2018 (Co-authored)
31.	2004/06	ADAMプロテアーゼの糖鎖修飾が器官形成に重要な役割を果たす │ 実験医学 │ 22,pp.1289-1292 (Co-authored)
32.	2004/01	An NDPase links ADAM protease glycosylation with organ morphogenesis in C-elegans │ Nat. Cell Biol. │ 6 (1),pp.31-37 (Co-authored)
33.	2000/02	Chemotactic migration of mesencephalic neural crest cells in the mouse │ Dev. Dyn. │ 217 (2),pp.170-179 (Co-authored)
34.	1999/01	Spatial and temporal changes in chondroitin sulfate distribution in the sclerotome play an essential role in the formation of migration patterns of mouse neural crest cells │ Dev. Dyn. │ 214 (1),pp.55-65 (Co-authored)
35.	1998/12	神経冠細胞の移動様式とその形成機構 │ 脳の科学 │ 20,pp.1287-1293 (Co-authored)
36.	1996/08	New monoclonal antibody (4E9R) identifies mouse neural crest cells │ Dev. Dyn. │ 206 (4),pp.368-378 (Co-authored)
37.	1995/04	BH (BLACK AT HATCH) GENE APPEARS TO CAUSE WHOLE-BODY HEMORRHAGE IN HOMOZYGOUS EMBRYOS OF JAPANESE-QUAIL (COTURNIX-COTURNIX-JAPONICA) │ J. Exp. Zool. │ 271 (6),pp.441-451 (Co-authored)